LINKS
Organizations
Research Tools
Databases
RNA-based EU funded groups
LINKS TO RELATED WEB SITES
ORGANIZATIONS

ORGANIZATION LINK
The RNA Society http://www.rnasociety.org/
The National Insitute of Health http://www.nih.gov
6th Framework Programme of European Union http://fp6.cordis.lu/index.cfm?fuseaction=UserSite.FP6HomePage
7th Framework Programme of European Union http://www.cordis.lu/fp7/
RESEARCH TOOLS

ORGANIZATION LINK
RNA Webring http://j.webring.com/hub?ring=rna
RNA Workbench http://www.ebi.ac.uk/asd-srv/wb.cgi
Text mining for alternative splicing http://www.bork.embl.de/LSAT/
ESE finder at CSHL http://rulai.cshl.edu/tools/ESE/
Rescue EST at MIT http://genes.mit.edu/burgelab/rescue-ese/
Collection of RNA resources by Steve Mount http://www.life.umd.edu/labs/mount/RNAinfo/RNAlinks.html
Alex Dong Li's SpliceSiteFinder http://www.genet.sickkids.on.ca/~ali/splicesitefinder.html
Splice site prediction by neuronal network http://www.fruitfly.org/seq_tools/splice.html
Genescan at MIT http://genes.mit.edu/GENSCAN.html
Easy RNA Profile Identification http://tagc.univ-mrs.fr/erpin/
Molecular station- a web based collection of protocols and tools http://www.molecularstation.com/
Scoring of 5’ splice sites http://genes.mit.edu/burgelab/maxent/Xmaxentscan_scoreseq.html
Scoring of 3’ splice sites http://genes.mit.edu/burgelab/maxent/Xmaxentscan_scoreseq_acc.html
Restriction digests on the web http://tools.neb.com/NEBcutter2/index.php
DATABASES

ORGANIZATION LINK
DNA Database http://www.dna.com
Genomics, Proteomics and Bioinformatics Knowledge Base http://www.123genomics.com/files/analysis.html
Alternative splicing database (ASD) http://www.ebi.ac.uk/asd/
Alternative transcript diversity database http://www.ebi.ac.uk/atd/
PubMed http://www.ncbi.nlm.nih.gov/entrez/query.fcgi
Wormbase http://www.wormbase.org/
Genecards http://nciarray.nci.nih.gov/cards/
SnoRNA database http://www-snorna.biotoul.fr/index.php
RNA-BASED EU FUNDED GROUPS

ORGANIZATION LINK
RIBOSYS - Systems Biology of RNA Metabolism in Yeast http://www.biology.ed.ac.uk/research/grants/ribosys/
EPIGENOME http://epigenome.eu/
http://www.epigenome-noe.net/
RIBOREG - Novel roles for non-coding RNA in differentiation and disease http://www.isv.cnrs-gif.fr/mc/riboreg/index.php?option=content&task=view&id=8&Itemid=26
EURExpress II - A transcriptome-wide atlas database for the developing mouse embryo established by RNA in situ hybridization. http://www.eurexpress.org/ee/intro.html
RIGHT - RNA Interference Technology as Human Therapeutic Tool http://www.ip-right.org/
SIROCCO - Silencing RNAs: organisers and coordinators of complexity in eukaryotic organisms http://www.sirocco-project.eu/